There is no local State or Catholic primary school located in Junortoun. Local families typically send their children to schools located in Strathfieldsaye, Kennington or central Bendigo.
List of some local schools serving Bendigo (including Junortoun)
- Strathfieldsaye Primary School (P-6)
- Kennington Primary School (P-6)
- St Francis of the Fields Primary School, Strathfieldsaye (P-6)
- St Therese’s Primary School, Kennington (P-6)
- Creek Street Christian College, Bendigo (P-10)
- Girton Grammar School, Bendigo (P-12)
- Victory Christian College (P-12)
- Bendigo South-East Secondary College, Bendigo (7-10)
- Weeroona College, Bendigo (7-12)
- Catholic College Bendigo (7-12) campuses in Junortoun (7-9) and Bendigo (10-12).
- Bendigo Senior Secondary College, Bendigo (11-12)